IDProbes: Interactive version of genomePlot
In snapCGH: Segmentation, normalisation and processing of aCGH data

Description Usage Arguments Author(s) See Also

Interactive version of genomePlot. Allows the user to click near a probe and the name of that probe will be displayed next to it.

IDProbes(input, array = 1, naut = 22, Y = FALSE, X
                 = FALSE, status, values, pch, cex, col, chrominfo =
                 chrominfo.Mb, ylim = c(-2, 2), ylb = "Log2Ratio",
                 chrom.to.plot = 1, xlim = c(0,NA))

`input`	an object of class `MAList` or `SegList`
`array`	integer of the array (sample) to be plotted.
`naut`	number of autosomes in the organism
`Y`	TRUE if chromosome Y is to be plotted, FALSE otherwise
`X`	TRUE if chromosome X is to be plotted, FALSE otherwise
`status`	character vector giving the control status of each spot on the array, of same length as the number of rows of `log2ratios(input)`. If omitted, all points are plotted in the default color, symbol and size.
`values`	character vector giving values of `status` to be highlighted on the plot. Defaults to unique values of `status`. Ignored if there is no `status` vector.
`pch`	vector or list of plotting characters. Default to integer code 16. Ignored is there is no `status` vector.
`col`	numeric or character vector of colors, of the same length as `values`. Defaults to `1:length(values)`. Ignored if there is no `status` vector.
`cex`	numeric vector of plot symbol expansions, of the the same length as `values`. Defaults to 0.2 for the most common `status` value and 1 for the others. Ignored if there is no `status` vector.
`chrominfo`	a chromosomal information associated with the mapping of the data.
`ylim`	Minimum y-scale to use for plotting.
`chrom.to.plot`	Specify which chromosome to plot
`ylb`	label for the Y-axis.
`xlim`	limits for the x-axis