removeByWeights: Remove clones based on a weights matrix
In snapCGH: Segmentation, normalisation and processing of aCGH data
Description
Usage
Arguments
Author(s)
See Also
Description
An example function to be used by the filterClones method.
This function takes an MA list, a weights matrix and a threshold
and returns the indices of any clones with weight below the
threshold.
Usage
1
removeByWeights(MA, weights=MA$weights, threshold = 0.2)
Arguments
MA
An object of class MAList
weights
A matrix with the same dimensions as MA containing
weight information.
threshold
Threshold value. Any clones with weight below this
are removed.
Author(s)
Mike Smith
See Also
snapCGH documentation built on Nov. 8, 2020, 5:31 p.m.
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Description Usage Arguments Author(s) See Also
Description
An example function to be used by the filterClones method. This function takes an MA list, a weights matrix and a threshold and returns the indices of any clones with weight below the threshold.
Usage
1 | removeByWeights(MA, weights=MA$weights, threshold = 0.2)
|
Arguments
MA |
An object of class |
weights |
A matrix with the same dimensions as MA containing weight information. |
threshold |
Threshold value. Any clones with weight below this are removed. |
Author(s)
Mike Smith
See Also
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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