Segmentation States - class
A list based class for storing the results of a segmentation algorithm.
They are generally created by running one of the following functions
Objects should contain the following list components:
||Predicted value of the state.|
||The number of states per chromosome. Each row represents a chromosome and each column is an array.|
||data.frame that contains the chromosome and position on the chromosome for each clone. Used for plotting functions.|
||Smoothed value for the clone.|
||Probability of the clone being in the assigned state.|
SegLists can be subsetted and combined. They also return dimensions
so functions such as
ncol are also defined.
SegList inherits the
show method from the Limma class
LargeDataObject. This means that the
will print in a relatively compact way.