API for snapCGH
Segmentation, normalisation and processing of aCGH data.

Global functions
IDProbes Man page
LargeDataObject-class Man page
MergeLevels.new Man page Source code
MergeLevels.old Man page
SegList-class Man page
Viterbi.five Man page
Viterbi.four Man page
Viterbi.three Man page
Viterbi.two Man page
[.SegList Man page
cbind.SegList Man page Source code
chrominfo.Mb Man page
combine.func Man page
compareBreakPoints Man page Source code
compareSegmentations Man page Source code
convert.output Man page
dim Man page
dim,SegList-method Man page
dim.MAList Man page
dim.RGList Man page
dim.SegList Man page Source code
dimnames Man page
dimnames,SegList-method Man page
dimnames.SegList Man page Source code
filterClones Man page Source code
find.param.five Man page
find.param.four Man page
find.param.one Man page
find.param.three Man page
find.param.two Man page
findBreakPoints Man page Source code
fit.model Man page
floor.func Man page
generate.data Man page
genomePlot Man page
heatmapGenome Man page
imputeMissingValues Man page
length Man page
length,SegList-method Man page
length.MAList Man page
length.RGList Man page
length.SegList Man page Source code
log2ratios Man page Source code
maPalette Man page
mergeStates Man page
non.zero.length.distr.non.tiled Man page
non.zero.length.distr.tiled Man page
plotChrom Man page
plotSegmentedGenome Man page
plotValChrom Man page
plotValGenome Man page
plotvalChrom.func Man page
print.SegList Man page
processCGH Man page
prop.na Man page
rbind.SegList Man page Source code
read.clonesinfo Man page Source code
readPositionalInfo Man page
removeByWeights Man page Source code
run.nelder Man page Source code
runBioHMM Man page
runDNAcopy Man page Source code
runGLAD Man page Source code
runHomHMM Man page
runTilingArray Man page Source code
sample.names Man page
show,LargeDataObject-method Man page
show,SegList-method Man page
simulateData Man page
states.hmm.func Man page
zero.length.distr.non.tiled Man page
zero.length.distr.tiled Man page
zoomChromosome Man page Source code
zoomGenome Man page Source code
snapCGH documentation built on Nov. 17, 2017, 10:51 a.m.