find.param.one: Yields output when there is 1 underlying states
In snapCGH: Segmentation, normalisation and processing of aCGH data
Description
Usage
Arguments
Value
Author(s)
Description
This function provides the output (means/variances, transition matrix, likelihood) when the heterogeneous HMM is fitted with one underlying state.
It is a workhorse of the process.data function.
Usage
1
find.param.one(output.optim)
Arguments
output.optim
The output from fitting a heterogeneous HMM when there is one underlying states
Value
This function outputs the state means/variances, transition matrices, rate parameters, maximised likelihood and convergence information provided
by fitting a heterogeneous HMM with one underlying state.
Author(s)
John Marioni
snapCGH documentation built on Nov. 8, 2020, 5:31 p.m.
R Package Documentation
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Description Usage Arguments Value Author(s)
Description
This function provides the output (means/variances, transition matrix, likelihood) when the heterogeneous HMM is fitted with one underlying state. It is a workhorse of the process.data function.
Usage
1 | find.param.one(output.optim)
|
Arguments
output.optim |
The output from fitting a heterogeneous HMM when there is one underlying states |
Value
This function outputs the state means/variances, transition matrices, rate parameters, maximised likelihood and convergence information provided by fitting a heterogeneous HMM with one underlying state.
Author(s)
John Marioni
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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