Files in snapCGH

Segmentation, normalisation and processing of aCGH data

R/Viterbi.two.R R/find.param.four.R R/readPositionalInfo.R R/hmm.R R/chrominfo.Mb.R R/misc.R R/IDProbes.R R/find.param.five.R R/zoomFunctions.R R/SegAnalysis.R R/classes.R R/findBreakPoints.R R/Newplotting.R R/fit.model.R R/find.param.one.R R/Viterbi.four.R R/runBioHMM.R R/runTilingArray.R R/find.param.two.R R/find.param.three.R R/runDNAcopy.R R/filter.R R/simulateData.R R/Viterbi.three.R R/convert.output.R R/processCGH.R R/runGLAD.R R/Viterbi.five.R R/MergeStates.R man/findBreakPoints.Rd man/runBioHMM.Rd man/read.clonesinfo.Rd man/SegList.Rd man/fit.model.Rd man/find.param.one.Rd man/removeByWeights.Rd man/zoomChromosome.Rd man/Viterbi.five.Rd man/convert.output.Rd man/dimnames.Rd man/Viterbi.two.Rd man/find.param.two.Rd man/readPositionalInfo.Rd man/imputeMissingValues.Rd man/sim.structure.Rd man/plotSegmentedGenome.Rd man/log2ratios.Rd man/Viterbi.three.Rd man/filter.Rd man/cbind.Rd man/zoomGenome.Rd man/runDNAcopy.Rd man/LargeDataObject.Rd man/processCGH.Rd man/find.param.four.Rd man/runGLAD.Rd man/genomePlot.Rd man/find.param.five.Rd man/Viterbi.four.Rd man/runHMM.Rd man/runTilingArray.Rd man/find.param.three.Rd man/IDProbes.Rd man/heatmapGenome.Rd man/mergeStates.Rd man/chrominfo.Mb.Rd man/compareSegmentations.Rd man/dim.Rd inst/doc/snapCGHguide.R inst/doc/snapCGHguide.pdf