beadc: Calculates the number of samples with bead count <3 for each...
In wateRmelon: Illumina 450 methylation array normalization and metrics
Description
Usage
Arguments
Value
Note
Author(s)
References
Description
Calculates the number of samples with bead count <3 for each probe in matrix of bead count values.
Usage
1
beadc(x)
Arguments
x
matrix of bead count values returned by the beadcount function
Value
Vector of number of samples with bead count <3 for each probe
Note
The beadc function is internal to the pfilter function
Author(s)
ruth.pidsley@kcl.ac.uk
References
[1] Pidsley R, Wong CCY, Volta M, Lunnon K, Mill J, Schalkwyk LC:
A data-driven approach to preprocessing Illumina 450K methylation
array data (submitted)
wateRmelon documentation built on Nov. 8, 2020, 7:47 p.m.
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Description Usage Arguments Value Note Author(s) References
Description
Calculates the number of samples with bead count <3 for each probe in matrix of bead count values.
Usage
1 | beadc(x)
|
Arguments
x |
matrix of bead count values returned by the beadcount function |
Value
Vector of number of samples with bead count <3 for each probe
Note
The beadc function is internal to the pfilter function
Author(s)
ruth.pidsley@kcl.ac.uk
References
[1] Pidsley R, Wong CCY, Volta M, Lunnon K, Mill J, Schalkwyk LC: A data-driven approach to preprocessing Illumina 450K methylation array data (submitted)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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