got: Internal functions for Illumina i450 normalization functions
In wateRmelon: Illumina 450 methylation array normalization and metrics
Description
Usage
Arguments
Details
Author(s)
References
Description
got and fot find the annotation column differentiating type I and type II
assays in MethylSet (got) or MethyLumiSet (fot) objects. pop extracts columns
from IlluminaHumanMethylation450k.db
Usage
1
2
Arguments
x
a MethyLumiSet
obj
a MethylSet
Details
got returns a character vector of 'I' and 'II', fot returns the index of the relevant column.
pop returns a data frame
Author(s)
Leonard.Schalkwyk@kcl.ac.uk
References
Pidsley R, Wong CCY, Volta M, Lunnon K, Mill J, Schalkwyk LC:
A data-driven approach to preprocessing Illumina 450K methylation
array data (submitted)
wateRmelon documentation built on Nov. 8, 2020, 7:47 p.m.
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Description Usage Arguments Details Author(s) References
Description
got and fot find the annotation column differentiating type I and type II assays in MethylSet (got) or MethyLumiSet (fot) objects. pop extracts columns from IlluminaHumanMethylation450k.db
Usage
1 2 |
Arguments
x |
a MethyLumiSet |
obj |
a MethylSet |
Details
got returns a character vector of 'I' and 'II', fot returns the index of the relevant column.
pop returns a data frame
Author(s)
Leonard.Schalkwyk@kcl.ac.uk
References
Pidsley R, Wong CCY, Volta M, Lunnon K, Mill J, Schalkwyk LC: A data-driven approach to preprocessing Illumina 450K methylation array data (submitted)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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