genkme - genotype calling with 1d k-means
genkus - apply genkme to available SNPs
getsnp - grep the rs-numbered probes
gcose - calculate between-sample SNP standard error
gcoms - calculate between-sample SNP mean-squared deviation
a vector or matrix of numeric values (betas, between 0 and 1)
initial values for cluster positions
Pidsley R, Wong CCY, Volta M, Lunnon K, Mill J, Schalkwyk LC: A data-driven approach to preprocessing Illumina 450K methylation array data (submitted)
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