Provides statistical tools for Bayesian structure learning in undirected graphical models with both continuous and discrete variables.

Author | Abdolreza Mohammadi and Ernst Wit |

Date of publication | 2017-01-09 21:45:49 |

Maintainer | Abdolreza Mohammadi <a.mohammadi@rug.nl> |

License | GPL (>= 3) |

Version | 2.32 |

https://www.tilburguniversity.edu/webwijs/show/a.mohammadi.htm |

**bdgraph:** Search algorithm in graphical models

**BDgraph-internal:** Internal BDgraph functions and datasets

**bdgraph.npn:** Nonparametric transfer

**BDgraph-package:** Bayesian Structure Learning in Graphical Models

**bdgraph.sim:** Synthetic graph data generator

**bdgraph.ts:** Search algorithm in time series graphical models

**compare:** Comparing the results

**geneExpression:** Human gene expression dataset

**gnorm:** Log of the normalizing constant of G-Wishart distribution

**pgraph:** Posterior probabilities of the graphs

**plinks:** Estimated posterior link probabilities

**plot.bdgraph:** Plot function for 'S3' class '"bdgraph"'

**plotcoda:** Convergence plot

**plotroc:** ROC plot

**plot.sim:** Plot function for 'S3' class '"sim"'

**print.bdgraph:** Print function for 'S3' class '"bdgraph"'

**print.sim:** Print function for 'S3' class '"sim"'

**rcwish:** Sampling from Complex Wishart distribution

**rgcwish:** Sampling from complex G-Wishart distribution

**rgwish:** Sampling from G-Wishart distribution

**rwish:** Sampling from Wishart distribution

**select:** Graph selection

**summary.bdgraph:** Summary function for 'S3' class '"bdgraph"'

**surveyData:** Labor force survey data

**traceplot:** Trace plot of graph size

BDgraph

BDgraph/src

BDgraph/src/gm_rj.cpp

BDgraph/src/Makevars

BDgraph/src/copula.cpp

BDgraph/src/gcgm_DMH.cpp

BDgraph/src/rgwish.h

BDgraph/src/ggm_bd.cpp

BDgraph/src/bd_for_ts.cpp

BDgraph/src/rgwish.cpp

BDgraph/src/matrix.cpp

BDgraph/src/MyLapack.cpp

BDgraph/src/MyLapack.h

BDgraph/src/copula.h

BDgraph/src/gcgm_bd.cpp

BDgraph/src/Makevars.win

BDgraph/src/ggm_DMH.cpp

BDgraph/src/matrix.h

BDgraph/NAMESPACE

BDgraph/NEWS

BDgraph/data

BDgraph/data/surveyData.RData

BDgraph/data/geneExpression.RData

BDgraph/R

BDgraph/R/select.R
BDgraph/R/rgwish.R
BDgraph/R/rgcwish.R
BDgraph/R/bdgraph.R
BDgraph/R/plotcoda.R
BDgraph/R/bdgraph.ts.R
BDgraph/R/plinks.R
BDgraph/R/gnorm.R
BDgraph/R/traceplot.R
BDgraph/R/pgraph.R
BDgraph/R/rwish.R
BDgraph/R/compare.R
BDgraph/R/rcwish.R
BDgraph/R/bdgraph.npn.R
BDgraph/R/bdgraph.sim.R
BDgraph/R/plotroc.R
BDgraph/MD5

BDgraph/DESCRIPTION

BDgraph/man

BDgraph/man/BDgraph-package.Rd
BDgraph/man/traceplot.Rd
BDgraph/man/print.bdgraph.Rd
BDgraph/man/print.sim.Rd
BDgraph/man/rgwish.Rd
BDgraph/man/plot.bdgraph.Rd
BDgraph/man/plotcoda.Rd
BDgraph/man/bdgraph.sim.Rd
BDgraph/man/plotroc.Rd
BDgraph/man/plinks.Rd
BDgraph/man/surveyData.Rd
BDgraph/man/rgcwish.Rd
BDgraph/man/plot.sim.Rd
BDgraph/man/bdgraph.npn.Rd
BDgraph/man/compare.Rd
BDgraph/man/pgraph.Rd
BDgraph/man/bdgraph.ts.Rd
BDgraph/man/summary.bdgraph.Rd
BDgraph/man/rcwish.Rd
BDgraph/man/geneExpression.Rd
BDgraph/man/BDgraph-internal.Rd
BDgraph/man/gnorm.Rd
BDgraph/man/select.Rd
BDgraph/man/bdgraph.Rd
BDgraph/man/rwish.Rd
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