Man pages for BDgraph
Bayesian Structure Learning in Graphical Models using Birth-Death MCMC
| adj2link | Extract links from an adjacency matrix |
| auc | Compute the area under the ROC curve |
| bdgraph | Search algorithm in graphical models |
| bdgraph.dw | Search algorithm for Gaussian copula graphical models for... |
| bdgraph.mpl | Search algorithm in graphical models using marginal... |
| bdgraph.npn | Nonparametric transfer |
| BDgraph-package | Bayesian Structure Learning in Graphical Models |
| bdgraph.sim | Graph data simulation |
| bdw.reg | Bayesian estimation of (zero-inflated) Discrete Weibull... |
| bf | Bayes factor for two graphs |
| compare | Graph structure comparison |
| conf.mat | Confusion Matrix |
| conf.mat.plot | Plot Confusion Matrix |
| covariance | Estimated covariance matrix |
| ddweibull | The Discrete Weibull Distribution (Type 1) |
| geneExpression | Human gene expression dataset |
| gnorm | Normalizing constant for G-Wishart |
| graph.sim | Graph simulation |
| link2adj | Extract links from an adjacency matrix |
| mse | Graph structure comparison |
| pgraph | Posterior probabilities of the graphs |
| plinks | Estimated posterior link probabilities |
| plot.bdgraph | Plot function for 'S3' class "'bdgraph'" |
| plotcoda | Convergence plot |
| plot.graph | Plot function for 'S3' class '"graph"' |
| plotroc | ROC plot |
| plot.sim | Plot function for 'S3' class "'sim'" |
| posterior.predict | Posterior Predictive Samples |
| precision | Estimated precision matrix |
| predict.bdgraph | Predict function for 'S3' class "'bdgraph'" |
| print.bdgraph | Print function for 'S3' class "'bdgraph'" |
| print.sim | Print function for 'S3' class "'sim'" |
| reinis | Risk factors of coronary heart disease |
| rgwish | Sampling from G-Wishart distribution |
| rmvnorm | Generate data from the multivariate Normal distribution |
| roc | Build a ROC curve |
| rwish | Sampling from Wishart distribution |
| select | Graph selection |
| sparsity | Compute the sparsity of a graph |
| summary.bdgraph | Summary function for 'S3' class "'bdgraph'" |
| surveyData | Labor force survey data |
| traceplot | Trace plot of graph size |
| trensfer | transfer for count data |
