View source: R/fit_Bayesian_FROC.R
Fit the null model, representing the null hypothesis that all modalities are same.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 | fit_Null_hypothesis_model_to_(
dataList,
DrawCurve = FALSE,
type_to_be_passed_into_plot = "p",
PreciseLogLikelihood = FALSE,
dataList.Name = "",
ModifiedPoisson = FALSE,
verbose = TRUE,
summary = TRUE,
mesh.for.drawing.curve = 10000,
significantLevel = 0.7,
cha = 1,
war = floor(ite/5),
ite = 10000,
dig = 3,
see = 1234569,
...
)
|
dataList |
A list, to be fitted a model.
For example, in case of a single reader and a single modality,
it consists of |
DrawCurve |
Logical: |
type_to_be_passed_into_plot |
"l" or "p". |
PreciseLogLikelihood |
Logical, that is |
dataList.Name |
This is not for user, but the author for this package development. |
ModifiedPoisson |
Logical, that is If Similarly, If For more details, see the author's paper in which I explained per image and per lesion. (for details of models, see vignettes , now, it is omiited from this package, because the size of vignettes are large.) If \frac{F_1+F_2+F_3+F_4+F_5}{N_L}, \frac{F_2+F_3+F_4+F_5}{N_L}, \frac{F_3+F_4+F_5}{N_L}, \frac{F_4+F_5}{N_L}, \frac{F_5}{N_L}, where N_L is a number of lesions (signal). To emphasize its denominator N_L, we also call it the False Positive Fraction (FPF) per lesion. On the other hand, if \frac{F_1+F_2+F_3+F_4+F_5}{N_I}, \frac{F_2+F_3+F_4+F_5}{N_I}, \frac{F_3+F_4+F_5}{N_I}, \frac{F_4+F_5}{N_I}, \frac{F_5}{N_I}, where N_I is the number of images (trial). To emphasize its denominator N_I, we also call it the False Positive Fraction (FPF) per image. The model is fitted so that
the estimated FROC curve can be ragraded
as the expected pairs of FPF per image and TPF per lesion ( or as the expected pairs of FPF per image and TPF per lesion ( If On the other hand, if So,data of FPF and TPF are changed thus, a fitted model is also changed whether Revised 2019 Dec 8 Revised 2019 Nov 25 Revised 2019 August 28 |
verbose |
A logical, if |
summary |
Logical: |
mesh.for.drawing.curve |
A positive large integer, indicating number of dots drawing the curves, Default =10000. |
significantLevel |
This is a number between 0 and 1. The results are shown if posterior probabilities are greater than this quantity. |
cha |
A variable to be passed to the function |
war |
A variable to be passed to the function |
ite |
A variable to be passed to the function |
dig |
A variable to be passed to the function |
see |
A variable to be passed to the function |
... |
Additional arguments |
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