Description Usage Arguments Value Examples
View source: R/validation_MRMC_Create_dataList_MRMC_Hit_from_rate_etc.R
Replicate Models For Replicated Data From True Distributions.
1 2 3 4 5 6 7 8 9 10 11 12  replicate_model_MRMC(
initial.seed = 123,
mu.truth = BayesianFROC::mu_truth,
v.truth = BayesianFROC::v_truth,
z.truth = BayesianFROC::z_truth,
NI = 200,
NL = 142,
ModifiedPoisson = FALSE,
replication.number = 2,
summary = FALSE,
ite = 1111
)

initial.seed 
The variable

mu.truth 
array of dimension (M,Q). Mean of the signal distribution of binormal assumption. 
v.truth 
array of dimension (M,Q). Standard Deviation of represents the signal distribution of binormal assumption. 
z.truth 
This is a parameter of the latent Gaussian assumption for the noise distribution. 
NI 
Number of Images. 
NL 
Number of Lesions. 
ModifiedPoisson 
Logical, that is If Similarly, If For more details, see the author's paper in which I explained per image and per lesion. (for details of models, see vignettes , now, it is omiited from this package, because the size of vignettes are large.) If \frac{F_1+F_2+F_3+F_4+F_5}{N_L}, \frac{F_2+F_3+F_4+F_5}{N_L}, \frac{F_3+F_4+F_5}{N_L}, \frac{F_4+F_5}{N_L}, \frac{F_5}{N_L}, where N_L is a number of lesions (signal). To emphasize its denominator N_L, we also call it the False Positive Fraction (FPF) per lesion. On the other hand, if \frac{F_1+F_2+F_3+F_4+F_5}{N_I}, \frac{F_2+F_3+F_4+F_5}{N_I}, \frac{F_3+F_4+F_5}{N_I}, \frac{F_4+F_5}{N_I}, \frac{F_5}{N_I}, where N_I is the number of images (trial). To emphasize its denominator N_I, we also call it the False Positive Fraction (FPF) per image. The model is fitted so that
the estimated FROC curve can be ragraded
as the expected pairs of FPF per image and TPF per lesion ( or as the expected pairs of FPF per image and TPF per lesion ( If On the other hand, if So,data of FPF and TPF are changed thus, a fitted model is also changed whether Revised 2019 Dec 8 Revised 2019 Nov 25 Revised 2019 August 28 
replication.number 
For fixed number of lesions, images, the dataset of hits and false alarms are replicated, and the number of replicated datasets are specified by this variable. 
summary 
Logical: 
ite 
A variable to be passed to the function 
A list, each component is an S4 object of class stanfitExtended
.
Revised 2019 Nov 7
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17  ## Not run:
#========================================================================================
# Plot FROC curves for a single model in the replicated models
#========================================================================================
list.of.fitted.model.objects < replicate_model_MRMC(replication.number = 2)
DrawCurves(StanS4class = list.of.fitted.model.objects[[2]],
modalityID = 1:list.of.fitted.model.objects[[2]]@dataList$M,
readerID = 1:list.of.fitted.model.objects[[2]]@dataList$Q )
# Revised 2019 Sept 9
## End(Not run)

Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.