Nothing
## ---- include = FALSE---------------------------------------------------------
knitr::opts_chunk$set(
collapse = TRUE,
comment = "#>"
)
## ----eval=FALSE---------------------------------------------------------------
#
# # Installation
# install.packages("BayesianFROC", dependencies = TRUE)
#
# # Load the package
# library(BayesianFROC);
#
# # Run the function
# BayesianFROC::fit_GUI_Shiny() # Variables are not required.
#
# #The above three are R codes,
# #so please execute them on R console or R-studio console.
#
## ----eval=FALSE---------------------------------------------------------------
# library("BayesianFROC")
# fit_GUI_Shiny()
## ----eval=FALSE---------------------------------------------------------------
# library("BayesianFROC")
# # Make an ROC dataset
# d<-BayesianFROC::ROC_data_creator2()
#
# # Fit the above bad ROC model
# f<-BayesianFROC::fit_srsc_ROC(d,ite = 111, summary = FALSE, cha = 1,)
#
# # Check the model. The result indicate MCMC does not converge.
# rstan::check_hmc_diagnostics(f)
#
# # Plot looks bad so BAD MODEL...
# rstan::traceplot(f)
#
# # Plot looks good but BAD MODEL...
# BayesianFROC::draw_ROC_Curve_from_fitted_model(f)
# BayesianFROC::fit_GUI_ROC() #FROC user interface is used, so under construction...
## ----eval=FALSE---------------------------------------------------------------
#
#
#
# fit <- fit_Bayesian_FROC(
# ite = 1111,
# cha = 1,
# summary = TRUE,
# Null.Hypothesis = F,
# dataList = dd # example data to be fitted a model
# )
#
#
# # Or GUI by Shiny
#
# fit_GUI_Shiny_MRMC()
#
## ----eval=FALSE---------------------------------------------------------------
#
# stanModel <- stan_model_of_sbc()
#
# Simulation_Based_Calibration_single_reader_single_modality_via_rstan_sbc(
# stanModel = stanModel,
# ite = 233,
# M = 111, # or 1111 which tooks a lot of times
# epsilon = 0.04,BBB = 1.1,AAA =0.0091,sbc_from_rstan = TRUE)
#
# # or
#
# stanModel <- stan_model_of_sbc()
#
# Simulation_Based_Calibration_single_reader_single_modality_via_rstan_sbc(
# stanModel = stanModel,
# ite = 233,
# M = 1111,
# epsilon = 0.04,BBB = 1.1,AAA =0.0091,sbc_from_rstan = TRUE)
#
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