Files in BreedingSchemeLanguage
Describe and Simulate Breeding Schemes
MD5
DESCRIPTION
README.md
NAMESPACE
inst/ChangeLog.txt
inst/CITATION
inst/Manual.pdf
inst/doc/Within_family_selection.Rmd
inst/doc/Load_existing_data.html
inst/doc/Optimize_parameter_vector.html
inst/doc/Intro_to_BSL.Rmd
inst/doc/Load_existing_data.Rmd
inst/doc/Intro_to_BSL.html
inst/doc/Within_family_selection.R
inst/doc/Optimize_parameter_vector.R
inst/doc/Intro_to_BSL.R
inst/doc/Within_family_selection.html
inst/doc/Optimize_parameter_vector.Rmd
inst/doc/Load_existing_data.R
inst/COPYRIGHTS/GENOME
inst/COPYRIGHTS/twister
inst/extdata/optimizationScheme.R
inst/extdata/exampleHapMapFile.hmp
inst/extdata/optimizationSchemeData.RData
vignettes/Within_family_selection.Rmd
vignettes/Intro_to_BSL.Rmd
vignettes/Load_existing_data.Rmd
vignettes/Optimize_parameter_vector.Rmd
R/importData.R
R/crossingFunc.R
R/plotData.R
R/testParameterOptimality.R
R/calculationFunc.R
R/defineCosts.R
R/defineSpecies.R
R/BreedingSchemeLanguage.R
R/defineVariances.R
R/selfFertilize.R
R/cross.R
R/predictValue.R
R/calcAmatrix.R
R/getCoalescentSim.R
R/genotype.R
R/initializePopulation.R
R/phenotype.R
R/makeMap.R
R/doubledHaploid.R
R/outputResults.R
R/select.R
src/Error.h
src/init.c
src/Main.cpp
src/genome.h
src/genome.cpp
src/MathConstant.h
src/Error.cpp
src/Random.cpp
src/Random.h
src/stochastic.cpp
src/stochastic.h
man/simHapMap.Rd
man/DH.Rd
man/makeProgeny.Rd
man/defineVariances.Rd
man/select.Rd
man/testParameterOptimality.Rd
man/calcPhenotypicValue.Rd
man/makeProgenies.Rd
man/makeMap.Rd
man/makeSelfs.Rd
man/predGameteMeanVar.Rd
man/selfFertilize.Rd
man/randomMateNoFam.Rd
man/makeGamete.Rd
man/addProgenyData.Rd
man/doubledHaploid.Rd
man/calcGenotypicValue.Rd
man/cross.Rd
man/outputResults.Rd
man/randomMate.Rd
man/getCoalescentSim.Rd
man/makeDHs.Rd
man/initializePopulation.Rd
man/genotype.Rd
man/phenotype.Rd
man/predictValue.Rd
man/pedigreeMate.Rd
man/calcAmatrix.Rd
man/defineSpecies.Rd
man/defineCosts.Rd
man/plotData.Rd
man/randomMateAll.Rd
man/phasedHapMap2mat.Rd
build/vignette.rds
