initialize_patients: Initialize Patient List

Description Usage Arguments Value Examples

View source: R/database.R

Description

All patient-specific information is deleted, including clinical event dates. Original notes and NLP annotations are preserved.

Usage

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initialize_patients(uri_fun, user, password, host, port, database)

Arguments

uri_fun

Uniform resource identifier (URI) string generating function for MongoDB credentials.

user

MongoDB user name.

password

MongoDB user password.

host

MongoDB host server.

port

MongoDB port.

database

MongoDB database name.

Value

Confirmation that requested operation was completed, or error message if attempt failed.

Examples

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## Not run: 
initialize_patients(uri_fun = mongo_uri_standard, user = 'John', password = 'db_password_1234',
host = 'server1234', port = NA, database = 'TEST_PROJECT')

## End(Not run)

CEDARS documentation built on Feb. 7, 2021, 5:06 p.m.