patient_roster_update: Update Patient List

In CEDARS: Simple and Efficient Pipeline for Electronic Health Record Annotation

Description

Updates the 'PATIENTS' collection with new entries. Used after NLP annotations have been uploaded.

Usage

patient_roster_update(uri_fun, user, password, host, port, database)

Arguments

uri_fun	Uniform resource identifier (URI) string generating function for MongoDB credentials.
user	MongoDB user name.
password	MongoDB user password.
host	MongoDB host server.
port	MongoDB port.
database	MongoDB database name.

CEDARS documentation built on Feb. 7, 2021, 5:06 p.m.