API for Coxmos
Cox MultiBlock Survival
| Global functions | |
|---|---|
| Beran | Man page Source code |
| CV | Man page Source code |
| Csurv | Man page Source code |
| NR | Man page |
| PI | Man page Source code |
| R2_indv | Source code |
| RocFun | Man page Source code |
| SURVCOMP_BRIER | Source code |
| SURVCOMP_BRIER_LP | Source code |
| XY.scale | Source code |
| X_multiomic | Man page |
| X_proteomic | Man page |
| Y_multiomic | Man page |
| Y_proteomic | Man page |
| barplot.mean_performace2.0 | Source code |
| boxplot.performance | Source code |
| cenROC | Man page Source code |
| cenROC_tryCatch | Source code |
| check.cv.weights | Source code |
| check.maxPredictors | Source code |
| check.maxPredictors.cox | Source code |
| check.mb.maxPredictors | Source code |
| check.mb.ncomp | Source code |
| check.ncomp | Source code |
| checkColnamesIllegalChars | Source code |
| checkColnamesIllegalChars.mb | Source code |
| checkFoldRuns | Source code |
| checkX.colnames | Source code |
| checkX.colnames.mb | Source code |
| checkXY.class | Source code |
| checkXY.mb.class | Source code |
| checkXY.rownames | Source code |
| checkXY.rownames.mb | Source code |
| checkY.colnames | Source code |
| check_AUC_improvement_spls1 | Source code |
| check_AUC_improvement_spls2 | Source code |
| check_class | Source code |
| check_min0_less1_variables | Source code |
| check_min0_max1_variables | Source code |
| comboplot.performance2.0 | Source code |
| computeFirstModelSW | Source code |
| cox | Man page |
| cox.prediction | Man page |
| coxEN | Man page Source code |
| coxEN_class | Source code |
| coxSW | Man page Source code |
| coxSW_class | Source code |
| cox_class | Source code |
| coxmos | Man page Source code |
| coxweightplot.fromVector.Coxmos | Source code |
| cv.coxEN | Man page Source code |
| cv.coxEN_class | Source code |
| cv.coxmos | Man page Source code |
| cv.getScoreFromWeight | Source code |
| cv.isb.splsdacox | Man page Source code |
| cv.isb.splsdacox_dynamic_class | Source code |
| cv.isb.splsdrcox | Man page Source code |
| cv.isb.splsdrcox_class | Source code |
| cv.isb.splsdrcox_dynamic_class | Source code |
| cv.isb.splsdrcox_penalty | Man page Source code |
| cv.isb.splsicox | Man page Source code |
| cv.isb.splsicox_class | Source code |
| cv.mb.coxmos | Man page Source code |
| cv.mb.splsdacox | Man page |
| cv.mb.splsdrcox | Man page |
| cv.sb.splsdacox | Man page Source code |
| cv.sb.splsdacox_dynamic_class | Source code |
| cv.sb.splsdrcox | Man page Source code |
| cv.sb.splsdrcox_dynamic_class | Source code |
| cv.sb.splsdrcox_penalty | Man page Source code |
| cv.sb.splsdrcox_penalty_class | Source code |
| cv.sb.splsicox | Man page |
| cv.splsdacox | Man page Source code |
| cv.splsdacox_dynamic_class | Source code |
| cv.splsdrcox | Man page Source code |
| cv.splsdrcox_dynamic_class | Source code |
| cv.splsdrcox_penalty | Man page |
| cv.splsdrcox_penalty_class | Source code Source code |
| cv.splsicox | Man page |
| cv.splsicox_class | Source code |
| deleteColumn | Source code |
| deleteIllegalChars | Source code |
| deleteNearZeroCoefficientOfVariation | Man page Source code |
| deleteNearZeroCoefficientOfVariation.mb | Man page Source code |
| deleteVariablesCox | Source code |
| deleteZeroOrNearZeroVariance | Man page Source code |
| deleteZeroOrNearZeroVariance.mb | Man page Source code |
| deleteZeroVarianceVariables | Source code |
| dnorkernel | Man page Source code |
| eval_Coxmos_model_per_variable | Man page |
| eval_Coxmos_model_per_variable.list | Man page |
| eval_Coxmos_models | Man page |
| evalplot_errorbar | Source code |
| factorToBinary | Man page Source code |
| getAUC_from_LP_2.0 | Source code |
| getAUC_vector | Source code |
| getAutoKM | Man page |
| getAutoKM.list | Man page |
| getCOMPLETE_BRIER | Source code |
| getCOMPLETE_LP | Source code |
| getCOMPLETE_LP_AUC | Source code |
| getCutoffAutoKM | Man page |
| getCutoffAutoKM.list | Man page |
| getDesign.MB | Man page |
| getEPV | Man page Source code |
| getEPV.mb | Man page Source code |
| getFAST_LP_AUC | Source code |
| getIndividualCox | Source code |
| getInfoCoxModel | Source code |
| getMaxNPredictors | Source code |
| getPvalFromCox | Source code |
| getRealNameVarFromCoxModel | Source code |
| getTestKM | Man page |
| getTestKM.list | Man page |
| getTimesVector | Source code |
| getTrainTest | Man page Source code |
| gg_color_hue | Source code |
| integ | Man page Source code |
| is.binaryMatrix | Source code |
| isInteraction | Source code |
| isb.splsdacox | Man page Source code |
| isb.splsdacox_dynamic_class | Source code |
| isb.splsdrcox | Man page Source code |
| isb.splsdrcox_class | Source code |
| isb.splsdrcox_dynamic_class | Source code |
| isb.splsdrcox_penalty | Man page Source code |
| isb.splsicox | Man page Source code |
| isb.splsicox_class | Source code |
| ker_dis_i | Man page Source code |
| kfunc | Man page Source code |
| kfunction | Man page Source code |
| lineplot.performace | Source code |
| lineplot.performace2.0 | Source code |
| loadingplot.Coxmos | Man page Source code |
| loadingplot.fromVector.Coxmos | Man page Source code |
| mb.coxmos | Man page Source code |
| mb.splsdacox | Man page |
| mb.splsdrcox | Man page |
| muro | Man page Source code |
| norm01 | Man page Source code |
| nsROC_tryCatch | Source code |
| plotZPH | Source code |
| plot_Coxmos.MB.PLS.model | Man page |
| plot_Coxmos.PLS.model | Man page Source code |
| plot_VAR_eval | Source code |
| plot_cox.event | Man page |
| plot_cox.event.list | Man page |
| plot_divergent.biplot | Man page Source code |
| plot_evaluation | Man page Source code |
| plot_evaluation.list | Man page Source code |
| plot_events | Man page Source code |
| plot_forest | Man page |
| plot_forest.list | Man page |
| plot_multipleObservations.LP | Man page |
| plot_multipleObservations.LP.list | Man page |
| plot_observation.eventDensity | Man page |
| plot_observation.eventHistogram | Man page |
| plot_observation.pseudobeta | Man page |
| plot_observation.pseudobeta.list | Man page |
| plot_pls_1comp | Source code |
| plot_proportionalHazard | Man page |
| plot_proportionalHazard.list | Man page |
| plot_pseudobeta | Man page |
| plot_pseudobeta.list | Man page |
| plot_sPLS_Coxmos | Man page Source code |
| plot_time.list | Man page Source code |
| pls2 | Source code Source code |
| point.sd.mean_performace2.0 | Source code |
| predict.Coxmos | Man page Source code |
| predict_mixOmics.pls | Source code Source code |
| print.Coxmos | Man page Source code |
| prop.vector.density | Source code |
| removeColumn | Source code |
| removeInfoSurvivalModel | Source code |
| removeNAorINFcoxmodel | Source code |
| removeNonSignificativeCox | Source code |
| retransformIllegalChars | Source code |
| risksetROC_tryCatch | Source code |
| round2any | Source code |
| round2any.POSIXct | Source code |
| round2any.difftime | Source code |
| round2any.double | Source code |
| round2any.integer | Source code |
| round2any.numeric | Source code |
| save_ggplot | Man page Source code |
| save_ggplot_lst | Man page Source code |
| sb.splsdacox | Man page Source code |
| sb.splsdacox_dynamic_class | Source code |
| sb.splsdrcox | Man page Source code |
| sb.splsdrcox_dynamic_class | Source code |
| sb.splsdrcox_penalty | Man page |
| sb.splsdrcox_penalty_class | Source code |
| sb.splsicox | Man page Source code |
| smoothROCtime_tryCatch | Source code |
| splitData_Iterations_Folds | Source code |
| splitData_Iterations_Folds_indexes | Source code |
| splsdacox | Man page Source code |
| splsdacox_dynamic_class | Source code |
| splsdrcox | Man page Source code |
| splsdrcox_dynamic_class | Source code |
| splsdrcox_penalty | Man page |
| splsdrcox_penalty_class | Source code Source code |
| splsicox | Man page Source code |
| splsicox_class | Source code |
| stepwise.coxph | Source code |
| stop_quietly | Source code |
| survivalROC_tryCatch | Source code |
| timesAsumption_AUC_Eval | Source code |
| transformIllegalChars | Source code |
| w.starplot.Coxmos | Man page Source code |
| wIQR | Man page Source code |
| wbw | Man page Source code |
| wquantile | Man page Source code |
| wvar | Man page Source code |
