IntLimResults-class: IntLimResults class

In IntLIM: Integration of Omics Data Using Linear Modeling

IntLimResults class

Description

IntLimResults class

Slots

interaction.pvalues

matrix of interaction p-values

interaction.adj.pvalues

matrix of adjusted interaction pvalues

interaction.coefficients

matrix of interaction coefficients

covariate.coefficients

data frame of coefficients for each covariate

covariate.pvalues

data frame of p-values for each covariate

model.rsquared

matrix of r-squared values

corr

matrix of correlations in group 1 and 2

filt.results

data frame of filtered results

warnings

a message of whether analytes have 0 standard deviation

stype

column name that represents sample type (by default, it will be used in the interaction term). Only 2 categories are currently supported.

outcome

outcome is either '1' or '2'

independent.var.type

independent variable type (either '1 or '2')

covar

describing additional variables and the class they form

continuous

"1" if outcome is continuous, "0" if not

IntLIM documentation built on Aug. 22, 2022, 5:05 p.m.