pvalCoefVolcano: 'volcano' plot (difference in correlations vs p-values) of...

In IntLIM: Integration of Omics Data Using Linear Modeling

'volcano' plot (difference in correlations vs p-values) of all pairs

Description

'volcano' plot (difference in correlations vs p-values) of all pairs

Usage

pvalCoefVolcano(
  inputResults,
  inputData,
  nrpoints = 10000,
  pvalcutoff = 0.05,
  coefPercentileCutoff = 0.9
)

Arguments

inputResults	Data frame with model results (output of ProcessResults())
inputData	Named list (output of FilterData()) with analyte levels and associated meta-data
nrpoints	number of points to be plotted in lowest density areas (see 'smoothScatter' documentation for more detail)
pvalcutoff	cutoff of FDR-adjusted p-value for filtering (default 0.05)
coefPercentileCutoff	cutoff of interaction coefficient percentile.

Value

a smoothScatter plot

IntLIM documentation built on Aug. 22, 2022, 5:05 p.m.