PlotPCA: PCA plots of data for QC
In IntLIM: Integration of Omics Data Using Linear Modeling
View source: R/plottingfunctions.R
PlotPCA R Documentation
PCA plots of data for QC
Description
PCA plots of data for QC
Usage
PlotPCA(inputData, viewer = TRUE, stype = "", palette = "Set1")
Arguments
inputData
IntLimObject output of ReadData()
viewer
whether the plot should be displayed in the RStudio viewer (TRUE) or
in Shiny/Knittr (FALSE)
stype
category to color-code by (can be more than two categories)
palette
choose an RColorBrewer palette ("Set1", "Set2", "Set3",
"Pastel1", "Pastel2", "Paired", etc.) or submit a vector of colors
Value
a highcharter object
IntLIM documentation built on Aug. 22, 2022, 5:05 p.m.
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View source: R/plottingfunctions.R
| PlotPCA | R Documentation |
PCA plots of data for QC
Description
PCA plots of data for QC
Usage
PlotPCA(inputData, viewer = TRUE, stype = "", palette = "Set1")
Arguments
inputData |
IntLimObject output of ReadData() |
viewer |
whether the plot should be displayed in the RStudio viewer (TRUE) or in Shiny/Knittr (FALSE) |
stype |
category to color-code by (can be more than two categories) |
palette |
choose an RColorBrewer palette ("Set1", "Set2", "Set3", "Pastel1", "Pastel2", "Paired", etc.) or submit a vector of colors |
Value
a highcharter object
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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