PlotPair: scatter plot of pairs (based on user selection)

In IntLIM: Integration of Omics Data Using Linear Modeling

scatter plot of pairs (based on user selection)

Description

scatter plot of pairs (based on user selection)

Usage

PlotPair(
  inputData,
  inputResults,
  outcome,
  independentVariable,
  independentAnalyteOfInterest,
  outcomeAnalyteOfInterest,
  palette = "Set1",
  viewer = TRUE
)

Arguments

inputData	IntLimObject output of ReadData() or FilterData()
inputResults	Data frame with model results (output of ProcessResults())
outcome	'1' or '2' must be set as outcome/independent variable
independentVariable	'1' or '2' must be set as outcome/independent variable
independentAnalyteOfInterest	independent analyte in pair
outcomeAnalyteOfInterest	outcome analyte in pair
palette	choose an RColorBrewer palette ("Set1", "Set2", "Set3", "Pastel1", "Pastel2", "Paired", etc.) or submit a vector of colors
viewer	whether the plot should be displayed in the RStudio viewer (TRUE) or in Shiny/Knittr (FALSE)

Value

No return value, called for side effects

IntLIM documentation built on Aug. 22, 2022, 5:05 p.m.