Nothing
tests/testthat/_snaps/dimensionalityReduction.md
In MOCHA: Modeling for Single-Cell Open Chromatin Analysis
bulkDimReduction works on a 3 sample test dataset
Code
LSIObj
Output
class: SummarizedExperiment
dim: 2 6
metadata(6): summarizedData Genome ... Directory History
assays(1): LSI
rownames(2): LSI1 LSI2
rowData names(0):
colnames(6): C2__scATAC_BMMC_R1 C2__scATAC_CD34_BMMC_R1 ...
C3__scATAC_CD34_BMMC_R1 C3__scATAC_PBMC_R1
colData names(5): Sample PassQC CellType Freq FragNumber
Try the MOCHA package in your browser
Any scripts or data that you put into this service are public.
MOCHA documentation built on May 29, 2024, 2:25 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
bulkDimReduction works on a 3 sample test dataset
Code
LSIObj
Output
class: SummarizedExperiment
dim: 2 6
metadata(6): summarizedData Genome ... Directory History
assays(1): LSI
rownames(2): LSI1 LSI2
rowData names(0):
colnames(6): C2__scATAC_BMMC_R1 C2__scATAC_CD34_BMMC_R1 ...
C3__scATAC_CD34_BMMC_R1 C3__scATAC_PBMC_R1
colData names(5): Sample PassQC CellType Freq FragNumber
Try the MOCHA package in your browser
Any scripts or data that you put into this service are public.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.