mkGenABELtfam: generate required fam family for PLINK TPED (.tfam) file

In Mega2R: Accessing and Processing a 'Mega2' Genetic Database

generate required fam family for PLINK TPED (.tfam) file

Description

Generate the six column .tfam file used with the .tped file. Note: Only the person id column appears to be used by GenABEL.

Usage

mkGenABELtfam(prefix, envir)

Arguments

prefix	prefix for generated file name
envir	'environment' containing SQLite database and other globals

Value

None

Examples

## Not run: 
db = system.file("exdata", "seqsimm.db", package="Mega2R")
ENV = read.Mega2DB(db)
mkGenABELtfam("foo", ENV)

## End(Not run)

Mega2R documentation built on May 29, 2024, 1:14 a.m.