mkVCFhdr: generate required VCF header
In Mega2R: Accessing and Processing a 'Mega2' Genetic Database
mkVCFhdr R Documentation
generate required VCF header
Description
Generate the initial boiler plate VCF, then generate ##INFO entries for each entry tag.
Finally, generate the ##contig entries for each chromosome.
Usage
mkVCFhdr(prefix, markers, envir)
Arguments
prefix
prefix for .vcf file
markers
data.frame of markers being processed
envir
"environment" containing SQLite database and other globals
Value
None
Examples
## Not run:
mkVCFhdr(prefix, NULL, envir)
## End(Not run)
Mega2R documentation built on May 29, 2024, 1:14 a.m.
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| mkVCFhdr | R Documentation |
generate required VCF header
Description
Generate the initial boiler plate VCF, then generate ##INFO entries for each entry tag. Finally, generate the ##contig entries for each chromosome.
Usage
mkVCFhdr(prefix, markers, envir)
Arguments
prefix |
prefix for .vcf file |
markers |
data.frame of markers being processed |
envir |
"environment" containing SQLite database and other globals |
Value
None
Examples
## Not run:
mkVCFhdr(prefix, NULL, envir)
## End(Not run)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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