mkVCFmap: generate required Mega2 map (.map) file

In Mega2R: Accessing and Processing a 'Mega2' Genetic Database

generate required Mega2 map (.map) file

Description

Generate the initial boiler plate VCF, then generate ##INFO entries for each entry tag. Finally, generate the ##contig entries for each chromosome.

Usage

mkVCFmap(prefix, markers, envir)

Arguments

prefix	prefix for .map file
markers	data.frame of markers being processed
envir	"environment" containing SQLite database and other globals

Value

None

Examples

## Not run: 
mkVCFmap(prefix, NULL, envir)

## End(Not run)

Mega2R documentation built on May 29, 2024, 1:14 a.m.