mkphenotype: generate a phenotype data frame
In Mega2R: Accessing and Processing a 'Mega2' Genetic Database
Description
Usage
Arguments
Value
Examples
Description
Convert data in phenotype_table to a data frame of columns that are phenotypes.
The columns may be affection status or quantitative values
Usage
1
mkphenotype(envir)
Arguments
envir
"environment" containing SQLite database and other globals
Value
is a data frame with FID column, then IID column, and then
an additional column for each phenotype.
Examples
1
2
3
4
5
db = system.file("exdata", "seqsimm.db", package="Mega2R")
ENV = read.Mega2DB(db)
out = mkphenotype()
out
Mega2R documentation built on Dec. 11, 2021, 9:12 a.m.
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Description Usage Arguments Value Examples
Description
Convert data in phenotype_table to a data frame of columns that are phenotypes. The columns may be affection status or quantitative values
Usage
1 | mkphenotype(envir)
|
Arguments
envir |
"environment" containing SQLite database and other globals |
Value
is a data frame with FID column, then IID column, and then an additional column for each phenotype.
Examples
1 2 3 4 5 | db = system.file("exdata", "seqsimm.db", package="Mega2R")
ENV = read.Mega2DB(db)
out = mkphenotype()
out
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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