API for Mega2R
Accessing and Processing a 'Mega2' Genetic Database
| Global functions | |
|---|---|
| .onLoad | Source code |
| DOSKAT | Man page Source code |
| DOfamSKATRC | Man page Source code |
| DOpedgene | Man page Source code |
| Mega2ENVGenABEL | Man page |
| Mega2GenABEL | Man page |
| Mega2GenABELClean | Man page |
| Mega2GenABELtst | Man page |
| Mega2R | Man page |
| Mega2R-TBLS | Man page |
| Mega2R-TBLSFilter | Man page |
| Mega2RVersion | Man page |
| Mega2SKAT | Man page |
| Mega2VCF | Man page Source code |
| Mega2famSKATRC | Man page |
| Mega2gdsfmt | Man page Source code |
| Mega2gdsfmtSNP | Source code |
| Mega2gdsfmtSeq | Source code |
| Mega2pedgene | Man page |
| TBLS | Man page |
| TBLSFilter | Man page |
| XSKAT | Source code |
| alleleID.alleles | Source code |
| alleleID.codes | Source code |
| applyFnToGenes | Man page |
| applyFnToMarkers | Man page |
| applyFnToRanges | Man page |
| clean_mega2rtutorial_data | Man page Source code |
| computeDosage | Man page |
| dbmega2_import | Man page Source code |
| dmpPed | Man page Source code |
| dump_mega2rtutorial_data | Man page Source code |
| getAlleles | Man page Source code |
| getgenotype_person | Man page Source code |
| getgenotypes | Man page Source code |
| getgenotypes_1 | Source code |
| getgenotypes_2 | Source code |
| getgenotypes_R | Man page Source code |
| getgenotypes_Ri | Source code |
| getgenotypes_forperson | Source code |
| getgenotypesdos | Man page Source code |
| getgenotypesdos_1 | Source code |
| getgenotypesdos_2 | Source code |
| getgenotypesgenabel | Man page Source code |
| getgenotypesgenabel_1 | Source code |
| getgenotypesgenabel_2 | Source code |
| getgenotypesraw | Man page Source code |
| getgenotypesraw_1 | Source code |
| getgenotypesraw_2 | Source code |
| init_SKAT | Man page |
| init_famSKATRC | Man page |
| init_pedgene | Man page |
| mkAlleles | Man page Source code |
| mkGenABELcoding | Man page Source code |
| mkGenABELgenotype | Man page Source code |
| mkGenABELphenotype | Man page |
| mkGenABELtfam | Man page |
| mkGenABELtped | Man page Source code |
| mkMarkers | Man page Source code |
| mkVCFfam | Man page |
| mkVCFfreq | Man page |
| mkVCFhdr | Man page |
| mkVCFmap | Man page |
| mkVCFpen | Man page |
| mkVCFphe | Man page |
| mk_markers_with_skip | Man page Source code |
| mk_unified_genotype_table | Man page Source code |
| mkfam | Man page |
| mkphenotype | Man page |
| read.Mega2DB | Man page Source code |
| resetMega2ENV | Man page |
| sampleFirst | Source code |
| seqBlock | Source code |
| seqsampleBlock | Source code |
| setAnnotations | Man page |
| setRanges | Man page |
| setfam | Man page |
| showMapNames | Man page |
| showMega2ENV | Man page Source code |
| showPhenoNames | Man page |
| snpBlock | Source code |
| snpFirst | Source code |
| snpsampleBlock | Source code |
| tryFn | Source code |
| tryFn1 | Source code |
| uniqueFamMember | Man page Source code |
| where_mega2rtutorial_data | Man page Source code |
