Man pages for MendelianRandomization
Mendelian Randomization Package
| calcium | Data on effect of calcium on fasting glucose (correlated... |
| ci_normal | Calculate confidence intervals using the normal distribution |
| ci_t | Calculate confidence intervals using the t-distribution |
| coursedata | Course data |
| decimals | Produce nicely rounded numbers |
| egger.bounds | Calculates confidence intervals for the MR-Egger method |
| Egger-class | Egger Class |
| extract.pheno.csv | Extract summarized data from a PhenoScanner .csv file... |
| getter | Applies method $ to different classes |
| het.weight | Heterogeneity-penalized weight function |
| IVW-class | IVW Class |
| ldlc | Data on lipid effects on coronary artery disease... |
| loglikelihood | Calculates log-likelihood with uncorrelated variants in... |
| loglikelihoodcorrel | Calculates log-likelihood with correlated variants in... |
| loglikelihoodrhocorrel | Calculates log-likelihood with correlation from sample... |
| MaxLik-class | MaxLik Class |
| mbe_boot | Mode-based estimate (Hartwig) bootstrap function |
| mbe_est | Mode-based estimate (Hartwig) estimation function |
| model.prior | Prior weight function |
| MRAll-class | MRAll Class |
| mr_allmethods | Mendelian randomization estimation using all methods |
| mr_conmix | Contamination mixture method |
| MRConMix-class | MRConMix Class |
| mr_egger | MR-Egger method |
| mr_hetpen | Heterogeneity-penalized method |
| MRHetPen-class | MRHetPen Class |
| mr_input | Inputting and formatting data for use in causal estimation |
| MRInput-class | MRInput Class |
| mr_ivw | Inverse-variance weighted method |
| mr_maxlik | Maximum-likelihood method |
| mr_mbe | Mode-based method of Hartwig |
| MRMBE-class | MRMBE Class |
| mr_median | Median-based method |
| mr_mvegger | Multivariable MR-Egger method |
| mr_mvinput | Inputting and formatting data for use in causal estimation |
| MRMVInput-class | MRMVInput Class |
| mr_mvivw | Multivariable inverse-variance weighted method |
| mr_plot | Draw a scatter plot of the genetic associations and/or causal... |
| MVEgger-class | MVEgger Class |
| MVIVW-class | MVIVW Class |
| penalised.weights | Calculates p-values for penalization of weights |
| penalised.weights.delta | Calculates p-values for penalization of weights with... |
| pheno_input | Extract summarized data from PhenoScanner |
| phenoscanner | PhenoScanner |
| r.weights | Calculates p-values for penalization of weights |
| r.weights.delta | Calculates p-values for penalization of weights with... |
| simpleCap | Capitalize a word |
| values | Applies method values() to different output classes |
| weighted.median | Weighted median function |
| weighted.median.boot.se | Weighted median standard error function |
| WeightedMedian-class | WeightedMedian Class |
