Description Usage Arguments Examples
Given a igraph object, adjacentPairs finds adjacent pairs of KOs
1 | adjacentPairs(g, ko2ko = FALSE, ...)
|
g |
graph object |
ko2ko |
if true returns data.frame of ko pairs, if false returns the compound which its connected with |
... |
ellipise pass in other arguments which are required |
1 2 3 4 5 6 7 8 9 | # gives ko 2 ko pairs
adjacentPairs(nitrogenMetab, ko2ko=TRUE)
# ko1 ko2 direction
#1 ko:K18246 ko:K01725 out
#2 ko:K18245 ko:K01725 out
#3 ko:K17877 ko:K17877 out
#4 ko:K17877 ko:K15876 out
#5 ko:K17877 ko:K15371 out
#6 ko:K17877 ko:K10946 out
|
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