koname: Gives KO details when supplied with KO id

In MetamapsDB: Network Analysis of Metabolic Pathways and Gene Based Assemblies in Metagenomics

Description

Gives KO details when supplied with KO id

Usage

koname(ko = "K00001", minimal = TRUE, test = FALSE, ...)

Arguments

ko	the koid
minimal	return minimal details
test	if it should be run as a example
...	additional dbquery parameters

Examples

koname(test=TRUE)
# JSON response from DB
# {
#  "columns" : [ "ko.ko", "ko.name", "ko.definition"  ],
#    "data" : [ [ "ko:K00001", "E1.1.1.1, adh", "alcohol dehydrogenase [EC:1.1.1.1]"  ]  ]
#
#}
#
#       ko.ko       ko.name                      ko.definition
# 1 ko:K00001 E1.1.1.1, adh alcohol dehydrogenase [EC:1.1.1.1]

MetamapsDB documentation built on May 1, 2019, 9:23 p.m.