dbquery: Function for querying metamaps DB

In MetamapsDB: Network Analysis of Metabolic Pathways and Gene Based Assemblies in Metagenomics

Description

Takes variable queries with table output ie. no nodes no rels

Usage

dbquery(query, params = FALSE, cypherurl = NULL, user = NULL,
  password = NULL, justPost = FALSE, verbose = FALSE, test = FALSE,
  jsonresponse = "", ...)

Arguments

query	char string with cypher Query, rmbr to escape double quotes if any; read LUCENE
params	a list object. ie params required by a cypher query, false if query requires no parameters; default
cypherurl	address of database, inclusive of ports
user	database username
password	database password
justPost	its just a POST request
verbose	to print details out
test	for testing, function takes a given json response in the form of a character string provided in argument jsonresponse
jsonresponse	string equivalent to the json response from querying the database
...	allows for additional arguments to be passed into dbquery

MetamapsDB documentation built on May 1, 2019, 9:23 p.m.