findK: findK to find the optimum number of Ks
In MetamapsDB: Network Analysis of Metabolic Pathways and Gene Based Assemblies in Metagenomics
Description
Usage
Arguments
Value
Description
using cluster::clusGap
Usage
1
findK(theMatrix, kmax = 10, ko)
Arguments
theMatrix
two column data.frame with KS values of the before and after KOs in the reactions
kmax
the max number of Ks to test for; defaults to 10
ko
the ko of interest
Value
optimum number of Ks to choose
MetamapsDB documentation built on May 1, 2019, 9:23 p.m.
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Description Usage Arguments Value
Description
using cluster::clusGap
Usage
1 | findK(theMatrix, kmax = 10, ko)
|
Arguments
theMatrix |
two column data.frame with KS values of the before and after KOs in the reactions |
kmax |
the max number of Ks to test for; defaults to 10 |
ko |
the ko of interest |
Value
optimum number of Ks to choose
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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