kinship.emp.fast.between: Approximate empirical kinship

In MoBPS: Modular Breeding Program Simulator

Approximate empirical kinship

Description

Function to compute empirical kinship for a set of individuals (not all pairs of individuals are evaluated)

Usage

kinship.emp.fast.between(
  population = NULL,
  gen1 = NULL,
  database1 = NULL,
  cohorts1 = NULL,
  gen2 = NULL,
  database2 = NULL,
  cohorts2 = NULL,
  ibd.obs = 50
)

Arguments

population	Population list
gen1	Quick-insert for database1 (vector of all generations to export)
database1	First Groups of individuals to consider for the export
cohorts1	Quick-insert for database1 (vector of names of cohorts to export)
gen2	Quick-insert for database2 (vector of all generations to export)
database2	Second Groups of individuals to consider for the export
cohorts2	Quick-insert for database2 (vector of names of cohorts to export)
ibd.obs	Number of Individual pairs to sample for IBD estimation

Value

Empirical kinship matrix (IBD-based since Founders) per gen/database/cohort

Examples

data(ex_pop)
kinship.emp.fast(population=ex_pop,gen=2)

MoBPS documentation built on Nov. 5, 2025, 6:26 p.m.