effect.estimate.add: Estimation of marker effects

Description Usage Arguments Value Examples

View source: R/effect.estimate.add.R

Description

Function to estimate marker effects

Usage

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effect.estimate.add(geno, pheno, map = NULL)

Arguments

geno

genotype dataset (marker x individuals)

pheno

phenotype dataset (each phenotype in a row)

map

genomic map

Value

Empirical kinship matrix (IBD-based since Founders)

Examples

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data(ex_pop)
pheno <- get.pheno(ex_pop, gen=1:5)
geno <- get.geno(ex_pop, gen=1:5)
map <- get.map(ex_pop, use.snp.nr=TRUE)
real.bv.add <- effect.estimate.add(geno, pheno, map)

MoBPS documentation built on March 31, 2020, 5:22 p.m.