Files in PAC
Partition-Assisted Clustering and Multiple Alignments of Networks
MD5
NAMESPACE
DESCRIPTION
R/RcppExports.R
R/getAverageSpreadOf2SubpopClades.R
R/constellationPlot.R
R/JaccardSM.R
R/aggregateData.R
R/heatmapInput.R
R/outputRepresentativeNetworks_topEdges.R
R/MAN.R
R/fmeasure.R
R/getRepresentativeNetworks.R
R/MINetwork_simpliefied_topEdges.R
R/MINetwork_matrix_topEdges.R
R/refineSubpopulationLabels.R
R/PAC.R
R/renamePrunedSubpopulations.R
R/annotationMatrix_withSubpopProp.R
R/samplePass.R
R/recordWithinClusterSpread.R
R/MINetworkPlot_topEdges.R
R/getExtraneousCladeSubpopulations.R
R/outputNetworks_topEdges_matrix.R
R/annotateClades.R
R/runElbowPointAnalysis.R
src/registerDynamicSymbol.c
src/Makevars
src/RcppExports.cpp
src/util.h
src/util.cc
src/bsp.cc
src/pac-wrapper.cc
src/bsp.h
src/type.h
src/bspconst.h
inst/doc/intro.Rmd
inst/doc/intro.html
inst/doc/intro.R
inst/doc/intro.md
build/vignette.rds
vignettes/intro.Rmd
vignettes/references.bib
vignettes/Basal.Rdata
vignettes/IL7.Rdata
vignettes/intro.md
vignettes/BCR.Rdata
man/aggregateData.Rd
man/BSPLeaveCenter.Rd
man/getExtraneousCladeSubpopulations.Rd
man/PAC.Rd
man/runElbowPointAnalysis.Rd
man/MAN.Rd
man/heatmapInput.Rd
man/getRepresentativeNetworks.Rd
man/JaccardSM.Rd
man/annotateClades.Rd
man/MINetworkPlot_topEdges.Rd
man/outputRepresentativeNetworks_topEdges.Rd
man/recordWithinClusterSpread.Rd
man/getAverageSpreadOf2SubpopClades.Rd
man/renamePrunedSubpopulations.Rd
man/samplePass.Rd
man/MINetwork_matrix_topEdges.Rd
man/outputNetworks_topEdges_matrix.Rd
man/constellationPlot.Rd
man/refineSubpopulationLabels.Rd
man/fmeasure.Rd
man/annotationMatrix_withSubpopProp.Rd
man/MINetwork_simplified_topEdges.Rd
