getRepresentativeNetworks: Representative Networks
In PAC: Partition-Assisted Clustering and Multiple Alignments of Networks

View source: R/getRepresentativeNetworks.R

Outputs representative networks for clades/subpopulations larger than a size filter (very small subpopulations are not considered in downstream analyses)

1 2	getRepresentativeNetworks(sampleIDs, dim_subset, SubpopSizeFilter, num_networkEdge)

`sampleIDs`	sampleID vector
`dim_subset`	a string vector of string names to subset the data columns for PAC; set to NULL to use all columns
`SubpopSizeFilter`	the cutoff for small subpopulations. Smaller subpopulations have unstable covariance structure, so no network structure is calculated
`num_networkEdge`	the number of edges to draw for each subpopulation mutual information network