recordWithinClusterSpread: Calculates the within cluster spread
In PAC: Partition-Assisted Clustering and Multiple Alignments of Networks
Description
Usage
Arguments
Value
View source: R/recordWithinClusterSpread.R
Description
Calculates the within cluster spread
Usage
1
recordWithinClusterSpread(sampleIDs, dim_subset = NULL, SubpopSizeFilter)
Arguments
sampleIDs
A vector of sample names.
dim_subset
a string vector of string names to subset the data columns for PAC; set to NULL to use all columns.
SubpopSizeFilter
threshold to filter out very small clusters with too few points; these very small subpopulations may not be outliers and not biologically relevant.
Value
Returns the sample within cluster spread
PAC documentation built on Feb. 18, 2021, 9:06 a.m.
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Description Usage Arguments Value
View source: R/recordWithinClusterSpread.R
Description
Calculates the within cluster spread
Usage
1 | recordWithinClusterSpread(sampleIDs, dim_subset = NULL, SubpopSizeFilter)
|
Arguments
sampleIDs |
A vector of sample names. |
dim_subset |
a string vector of string names to subset the data columns for PAC; set to NULL to use all columns. |
SubpopSizeFilter |
threshold to filter out very small clusters with too few points; these very small subpopulations may not be outliers and not biologically relevant. |
Value
Returns the sample within cluster spread
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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