renamePrunedSubpopulations: Prune away specified subpopulations in clades that are far...
In PAC: Partition-Assisted Clustering and Multiple Alignments of Networks
Description
Usage
Arguments
Value
View source: R/renamePrunedSubpopulations.R
Description
Prune away specified subpopulations in clades that are far away.
Usage
1
renamePrunedSubpopulations(pacman_results, subpopulationsToPrune)
Arguments
pacman_results
PAC-MAN analysis result matrix that contains network annotation, clade IDs and mean (centroid) clade expression levels.
subpopulationsToPrune
A vector of clade IDs; these clades will be pruned.
Value
Returns PAC-MAN analysis result matrix with pruned clades. The pruning process creates new clades to replace the original clade ID of the specified subpopulations.
PAC documentation built on Feb. 18, 2021, 9:06 a.m.
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Description Usage Arguments Value
View source: R/renamePrunedSubpopulations.R
Description
Prune away specified subpopulations in clades that are far away.
Usage
1 | renamePrunedSubpopulations(pacman_results, subpopulationsToPrune)
|
Arguments
pacman_results |
PAC-MAN analysis result matrix that contains network annotation, clade IDs and mean (centroid) clade expression levels. |
subpopulationsToPrune |
A vector of clade IDs; these clades will be pruned. |
Value
Returns PAC-MAN analysis result matrix with pruned clades. The pruning process creates new clades to replace the original clade ID of the specified subpopulations.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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