PAMpal
Load and Process Passive Acoustic Data

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PAMpal: Load and Process Passive Acoustic Data
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API

API for PAMpal
Load and Process Passive Acoustic Data

Global functions
$,AcousticEvent-method Man page
$,AcousticStudy-method Man page
$<-,AcousticEvent-method Man page
$<-,AcousticStudy-method Man page
.DollarNames.AcousticEvent Source code
.DollarNames.AcousticStudy Source code
.addPamWarning Source code
.onAttach Source code
AcousticEvent Source code
AcousticEvent-class Man page
AcousticStudy Source code
AcousticStudy-class Man page
PAMpal.accessors Man page
PAMpalSettings Man page Source code
PAMpalSettings-class Man page
Qfast Source code
[,AcousticEvent,ANY,ANY,ANY-method Man page
[,AcousticStudy,ANY,ANY,ANY-method Man page
[<-,AcousticEvent,ANY,ANY,ANY-method Man page
[<-,AcousticStudy,ANY,ANY,ANY-method Man page
[[,AcousticEvent,ANY,ANY-method Man page
[[,AcousticStudy,ANY,ANY-method Man page
[[<-,AcousticEvent,ANY,ANY,ANY-method Man page
[[<-,AcousticStudy,ANY,ANY,ANY-method Man page
addAnnotation Man page Source code
addBinaries Man page Source code
addCalibration Man page Source code
addDatabase Man page Source code
addDetector Source code
addEnvToEvent Source code
addFPOD Man page Source code
addFunction Man page Source code
addGps Man page
addGps,ANY-method Man page
addGps,AcousticEvent-method Man page
addGps,AcousticStudy-method Man page
addGps,data.frame-method Man page
addGps,list-method Man page
addHydrophoneDepth Man page Source code
addMeasures Man page Source code
addNote Man page Source code
addRecordings Man page Source code
addSettings Man page Source code
addWaveHeight Man page Source code
ancillary Man page
ancillary,AcousticEvent-method Man page
ancillary,AcousticStudy-method Man page
ancillary<- Man page
ancillary<-,AcousticEvent-method Man page
ancillary<-,AcousticStudy-method Man page
applyCalibration Man page Source code
autoMode Source code
binToSpecMat Source code
bindStudies Man page Source code
bntSplit Source code
bntSummaryTable Source code
calcIciMode Source code
calcTimeToNext Source code
calculateAverageSpectra Man page Source code
calculateDepth Source code
calculateEchoDepth Man page Source code
calculateICI Man page
calculateICI,AcousticEvent-method Man page
calculateICI,AcousticStudy-method Man page
calculateModuleData Man page Source code
cepstrumChecker Source code
checkAnnotation Man page Source code
checkColMatch Source code
checkConsecutive Source code
checkDepthCol Source code
checkGpsKey Source code
checkGroupOverlap Source code
checkGrouping Source code
checkIn Source code
checkMeasures Source code
checkNAVals Source code
checkNextDir Source code
checkPeakZero Source code
checkRecordings Source code
checkSameDetections Source code
checkSpeciesParams Source code
checkStudy Man page Source code
checkTime Source code
clickChecker Source code
clipAroundPeak Source code
cmapToChan Source code
countSweeps Source code
dbToFixedGroup Source code
depthFromDb Source code
depthToDf Source code
depthToEvent Source code
detDataToStudy Source code
detectorFilt Source code
detectors Man page
detectors,AcousticEvent-method Man page
detectors,AcousticStudy-method Man page
detectors<- Man page
detectors<-,AcousticEvent-method Man page
dfTimeToNext Source code
doAcCombine Source code
doBrightness Source code
doCalcs Source code
doCheck Source code
doContrast Source code
doFilter Source code
doLogAvg Source code
doNoteAdd Source code
doOneSr Source code
dropCols Source code
effort Man page
effort,AcousticStudy-method Man page
effort<- Man page
effort<-,AcousticStudy-method Man page
events Man page
events,AcousticStudy-method Man page
events<- Man page
events<-,AcousticStudy-method Man page
exStudy Man page
export_annomate Man page Source code
export_banter Man page Source code
fileLister Source code
fileMatcher Source code
files Man page
files,AcousticEvent-method Man page
files,AcousticStudy-method Man page
files<- Man page
files<-,AcousticEvent-method Man page
files<-,AcousticStudy-method Man page
fillAnno Source code
filter.AcousticEvent Source code
filter.AcousticStudy Man page Source code
filterBySwimSpeed Source code
filterEchoDepths Man page Source code
findCalibration Source code
findModuleNames Source code
findPathDiff Source code
findWavCol Source code
formatNotes Source code
functionChecker Source code
functionParser Source code
getAnnoTemplate Source code
getAnnotation Man page Source code
getBinaryData Man page Source code
getCallType Source code
getCepstrumData Man page Source code
getClickData Man page Source code
getClipData Man page Source code
getDbData Source code
getDetectorData Man page Source code
getEventGrouping Source code
getEventStart Source code
getFPODData Man page Source code
getFrequency Source code
getGPLData Man page Source code
getICI Man page Source code
getMatchingBinaryData Source code
getMeasures Man page Source code
getModuleType Source code
getNotes Man page Source code
getOnePathDiff Source code
getPamFft Source code
getSoundtrapLog Source code
getSr Source code
getTimeRange Source code
getWarnings Man page Source code
getWhistleData Man page Source code
gplChecker Source code
gps Man page
gps,AcousticStudy-method Man page
gps<- Man page
gps<-,AcousticStudy-method Man page
gpsFromDb Source code
hasParamNames Source code
iciDensity Source code
id Man page
id,AcousticEvent-method Man page
id,AcousticStudy-method Man page
id<- Man page
id<-,AcousticEvent-method Man page
id<-,AcousticStudy-method Man page
inInterval Source code
is.AcousticEvent Man page Source code
is.AcousticStudy Man page Source code
is.PAMpalSettings Man page Source code
loadFPOD Source code
loadPamguardXML Man page Source code
localizations Man page
localizations,AcousticEvent-method Man page
localizations<- Man page
localizations<-,AcousticEvent-method Man page
makeCalibration Source code
mapWavFolder Man page Source code
markAnnotated Man page Source code
markOneDetector Source code
matchEnvData,AcousticEvent-method Man page
matchEnvData,AcousticStudy-method Man page
matchRecordingUrl Man page Source code
matchSR Source code
matchTimeData Man page Source code
models Man page
models,AcousticStudy-method Man page
models<- Man page
models<-,AcousticStudy-method Man page
myDownsample Source code
myGram Source code
my_label Source code
nBins Source code
nCepstrum Man page Source code
nClicks Man page Source code
nDetections Man page Source code
nGPL Man page Source code
nWhistles Man page Source code
oneInterp Source code
oneUpper Source code
pamWarning Source code
parseDglLabel Source code
parseEventClipName Man page Source code
parseUTC Source code
pgDateToPosix Source code
plot.calibration Source code
plotCeps Source code
plotClick Source code
plotDataExplorer Man page Source code
plotEchogram Source code
plotGram Man page Source code
plotOneCeps Source code
plotSpectrogram Man page Source code
plotWaveform Man page Source code
plotWhistle Source code
plotWigner Man page Source code
ppVars Source code
pps Man page
pps,AcousticStudy-method Man page
pps<- Man page
pps<-,AcousticStudy-method Man page
prepAnnotation Man page Source code
printN Source code
processPgDb Source code
processPgDetections Man page Source code
processPgTime Source code
psxToChar Source code
readSa Source code
recNA Source code
removeBinaries Man page Source code
removeCalibration Man page Source code
removeDatabase Man page Source code
removeFunction Man page Source code
removeNote Man page Source code
removeSettings Man page Source code
roccaWhistleCalcs Man page Source code
runDepthReview Man page Source code
runIciReview Man page Source code
safeListAdd Source code
sampleDetector Man page Source code
sampleEvent Source code
scaleToOne Source code
setSpecies Man page Source code
setStep Source code
setSweep Source code
settings Man page
settings,AcousticEvent-method Man page
settings,AcousticStudy-method Man page
settings<- Man page
settings<-,AcousticEvent-method Man page
settings<-,AcousticStudy-method Man page
species Man page
species,AcousticEvent-method Man page
species,AcousticStudy-method Man page
species<- Man page
species<-,AcousticEvent-method Man page
standardCepstrumCalcs Man page Source code
standardClickCalcs Man page Source code
strsplitboth Source code
summariseDiveDepth Man page Source code
suppressPamWarnings Source code
testCeps Man page
testClick Man page
testGPL Man page
testWhistle Man page
timeJoin Man page Source code
trimToN Source code
unitToPeriod Source code
updateFiles Man page Source code
updatePamObject Man page Source code
validSettings Source code
wavToGram Source code
wavToGroup Source code
wavsToRanges Source code
whereUID Source code
whistleChecker Source code
withinLHS Source code
writeEventClips Man page Source code
writeOneClip Source code
writeWignerData Man page Source code
xml_getCepstrum Source code
xml_getClick Source code
xml_getDecimator Source code
xml_getDetectors Source code
xml_getFFT Source code
xml_getSa Source code
xml_getSources Source code
xml_getWMD Source code
PAMpal documentation built on April 4, 2025, 4:21 a.m.

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