Files in RAM

R for Amplicon-Sequencing-Based Microbial-Ecology

R/ordination_functions.R R/plot_misc.R R/taxonomy_functions.R R/network.R R/core.R R/dissim_functions_plot.R R/phylo_taxonomy.R R/internal_functions.R R/validation_functions.R R/utility_function.R R/plot_heatmaps.R R/group_CLUST.R R/seq_var.R R/assist_NB.R R/assist.ado.R R/metadata.R R/process_data.R R/read_and_write_files.R R/theme_ggplot.R R/group.Taxa.R R/summary.R man/Taxa.ord.Rd man/assist.ado.Rd man/shared.OTU.Rd man/OTU.recap.Rd man/seq_var.Rd man/OTU.subsets.Rd man/tax.split.Rd man/RAM.rank.formatting.Rd man/envis.NB.Rd man/location.formatting.Rd man/LCA.OTU.Rd man/dissim.heatmap.Rd man/transpose.OTU.Rd man/combine.OTU.Rd man/META.clust.Rd man/phylo_taxonomy.Rd man/group.spatial.Rd man/assist.ordination.Rd man/core.OTU.Rd man/fread.OTU.Rd man/shared.Taxa.Rd man/group.OTU.Rd man/data.clust.Rd man/top.groups.plot.Rd man/network_data.Rd man/RAM.dates.Rd man/valid.OTU.Rd man/filter.Taxa.Rd man/dissim.plot.Rd man/transpose.LCA.Rd man/group.Taxa.bar.Rd man/RAM.plotting.Rd man/pcoa.plot.Rd man/col.splitup.Rd man/fread.meta.Rd man/core.Taxa.Rd man/group.spec.Rd man/group.diversity.Rd man/group.Taxa.box.Rd man/reset.META.Rd man/phylog_taxonomy.Rd man/OTU.ord.Rd man/filter.META.Rd man/tax.abund.Rd man/group.rich.Rd man/group.abund.Taxa.Rd man/group.abundance.Rd man/data.revamp.Rd man/match.data.Rd man/core.OTU.rank.Rd man/group.heatmap.simple.Rd man/alignment.Rd man/OTU.diversity.Rd man/diversity.indices.Rd man/OTU.rarefy.Rd man/write.data.Rd man/correlation.Rd man/dissim.Rd man/assist.NB.Rd man/group.temporal.Rd man/tax.fill.Rd man/sample.locations.Rd man/sample.sites.Rd man/RAM.pal.Rd man/filter.OTU.Rd man/RAM.factors.Rd man/get.rank.Rd man/RAM.input.formatting.Rd man/factor.abundance.Rd man/read.meta.Rd man/ITS1_and_ITS2.Rd man/read.OTU.Rd man/group.indicators.Rd man/valid.taxonomy.Rd man/RAM-package.Rd man/group.abundance.meta.Rd man/sample.map.Rd man/meta.Rd man/group.heatmap.Rd man/group.venn.Rd man/theme_ggplot.Rd man/percent.classified.Rd build/RAM.pdf