get_trees | R Documentation |
extract a phylogenetic tree from the nexml
get_trees(nexml)
nexml |
a representation of the nexml object from which the data is to be retrieved |
an ape::phylo tree, if only one tree is represented.
Otherwise returns a list of lists of multiphylo trees.
To consistently receive the list of lists format (preserving
the hierarchical nature of the nexml), use get_trees_list
instead.
get_trees
get_flat_trees
get_item
comp_analysis <- system.file("examples", "comp_analysis.xml", package="RNeXML") nex <- nexml_read(comp_analysis) get_trees(nex)
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