CalcDispersion: Calculate dispersion of features

In Seurat: Tools for Single Cell Genomics

Calculate dispersion of features

Description

Calculate dispersion of features

Usage

CalcDispersion(
  object,
  mean.function = FastExpMean,
  dispersion.function = FastLogVMR,
  num.bin = 20,
  binning.method = "equal_width",
  verbose = TRUE,
  ...
)

Arguments

object	Data matrix
mean.function	Function to calculate mean
dispersion.function	Function to calculate dispersion
num.bin	Number of bins to use
binning.method	Method to use for binning. Options are 'equal_width' or 'equal_frequency'
verbose	Display progress

Seurat documentation built on May 29, 2024, 4:20 a.m.