DietSeurat | R Documentation |
Keep only certain aspects of the Seurat object. Can be useful in functions that utilize merge as it reduces the amount of data in the merge.
DietSeurat(
object,
counts = TRUE,
data = TRUE,
scale.data = FALSE,
features = NULL,
assays = NULL,
dimreducs = NULL,
graphs = NULL,
misc = TRUE
)
object |
Seurat object |
counts |
Preserve the count matrices for the assays specified |
data |
Preserve the data slot for the assays specified |
scale.data |
Preserve the scale.data slot for the assays specified |
features |
Only keep a subset of features, defaults to all features |
assays |
Only keep a subset of assays specified here |
dimreducs |
Only keep a subset of DimReducs specified here (if NULL, remove all DimReducs) |
graphs |
Only keep a subset of Graphs specified here (if NULL, remove all Graphs) |
misc |
Preserve the |
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