Signac: Analysis of Single-Cell Chromatin Data

A framework for the analysis and exploration of single-cell chromatin data. The 'Signac' package contains functions for quantifying single-cell chromatin data, computing per-cell quality control metrics, dimension reduction and normalization, visualization, and DNA sequence motif analysis. Reference: Stuart et al. (2021) <doi:10.1038/s41592-021-01282-5>.

Package details

AuthorTim Stuart [aut, cre] (<https://orcid.org/0000-0002-3044-0897>), Avi Srivastava [aut] (<https://orcid.org/0000-0001-9798-2079>), Paul Hoffman [ctb] (<https://orcid.org/0000-0002-7693-8957>), Rahul Satija [ctb] (<https://orcid.org/0000-0001-9448-8833>)
MaintainerTim Stuart <tstuart@nygenome.org>
LicenseMIT + file LICENSE
Version1.6.0
URL https://github.com/timoast/signac https://satijalab.org/signac
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("Signac")

Try the Signac package in your browser

Any scripts or data that you put into this service are public.

Signac documentation built on March 18, 2022, 6:53 p.m.