bed-mat-acc: Accessor methods for class 'bed'.

In bigsnpr: Analysis of Massive SNP Arrays

Accessor methods for class bed.

Description

Accessor methods for class bed.

Usage

## S4 method for signature 'bed,ANY,ANY,ANY'
x[i, j, ..., drop = TRUE]

## S4 method for signature 'bed_light,ANY,ANY,ANY'
x[i, j, ..., drop = TRUE]

Arguments

x	A bed object.
i	A vector of indices (or nothing). You can use positive and negative indices, and also logical indices (that are recycled).
j	A vector of indices (or nothing). You can use positive and negative indices, and also logical indices (that are recycled).
...	Not used. Just to make nargs work.
drop	Whether to drop dimensions (to a vector) when a dimension is 1. Default is TRUE.

Examples

bedfile <- system.file("extdata", "example-missing.bed", package = "bigsnpr")
(obj.bed <- bed(bedfile))
obj.bed[1:5, 1]
obj.bed[1:5, 1:2]
typeof(obj.bed[1, 1])

bigsnpr documentation built on Sept. 30, 2024, 9:18 a.m.