bigSNP-class: Class bigSNP
In bigsnpr: Analysis of Massive SNP Arrays
bigSNP-class R Documentation
Class bigSNP
Description
An S3 class for representing information on massive SNP arrays.
Value
A named list with at least 3 slots:
- genotypes
A FBM.code256 which is
a special Filebacked Big Matrix encoded with type raw (one byte
unsigned integer), representing genotype calls and possibly imputed
allele dosages. Rows are individuals and columns are SNPs.
- fam
A data.frame containing some information on the individuals
(read from a ".fam" file).
- map
A data.frame giving some information on the variants
(read from a ".bim" file).
See Also
snp_readBed
bigsnpr documentation built on Sept. 30, 2024, 9:18 a.m.
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| bigSNP-class | R Documentation |
Class bigSNP
Description
An S3 class for representing information on massive SNP arrays.
Value
A named list with at least 3 slots:
- genotypes
A FBM.code256 which is a special Filebacked Big Matrix encoded with type
raw(one byte unsigned integer), representing genotype calls and possibly imputed allele dosages. Rows are individuals and columns are SNPs.- fam
A
data.framecontaining some information on the individuals (read from a ".fam" file).- map
A
data.framegiving some information on the variants (read from a ".bim" file).
See Also
snp_readBed
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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