Example genotype data

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Description

genotype: example data of genotypes for each marker (rownames) and 100 strains such as recombinant inbred lines (RIL) (columnnames), with numeric values 1 and 0 (or A and B).

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Strain1 Strain2 Strain3 Strain4 Strain5
C1M1 1 0 0 0 1
C1M2 1 0 0 0 1
C1M3 1 0 0 0 1
C1M4 1 0 0 1 1
C1M5 1 0 0 1 1

Usage

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Format

genotype: 120 markers by 100 samples (Strains).

Author(s)

Yang Li <yang.li@rug.nl>, Gonzalo Vera <gonzalo.vera.rodriguez@gmail.com>
Rainer Breitling <r.breitling@rug.nl>, Ritsert Jansen <r.c.jansen@rug.nl>

Examples

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  ##load the data
  data(genotype)
  
  ##view part of the the data
  genotype[1:5,1:5]