pairLevel: Pair levels for paired RILs (or strains)
In designGG: Computational tool for designing genetical genomics experiments.

Description Usage Arguments Details Value Author(s) References See Also

Pair levels for two RILs (or strains) allocated into one slide (bTwoColorArray=TRUE). It is a subfunction needed for designScore function, but is not directly used.

1	pairLevel( xxx, rilNames )

`xxx`	can be `genotype.level`, `condition.level` or `interaction.level`
`rilNames`	names for all RILs (or strains) that have been selected for the experiment

This function is used only for two-color array.

Pair levels for two RILs (or strains) allocated into one slide.

Yang Li <yang.li@rug.nl>, Gonzalo Vera <gonzalo.vera.rodriguez@gmail.com>
Rainer Breitling <r.breitling@rug.nl>, Ritsert Jansen <r.c.jansen@rug.nl>

Y. Li, R. Breitling and R.C. Jansen. Generalizing genetical genomics: the added value from environmental perturbation, Trends Genet (2008) 24:518-524.
Y. Li, M. Swertz, G. Vera, J. Fu, R. Breitling, and R.C. Jansen. designGG: An R-package and Web tool for the optimal design of genetical genomics experiments. BMC Bioinformatics 10:188(2009)
http://gbic.biol.rug.nl/designGG

See Also designScore

designGG documentation built on May 2, 2019, 5:51 a.m.