Nothing
context("genetic_cor")
test_that("genetic_cor endpoint", {
skip_on_cran()
url <- getOption("epigraphdb.api.url")
trait <- "body mass index"
r <- httr::RETRY("GET", glue::glue("{url}/genetic-cor"),
query = list(
trait = trait
),
config = httr::add_headers(.headers = c("client-type" = "R", "ci" = "true"))
)
expect_equal(httr::status_code(r), 200)
expect_true(length(httr::content(r)) > 0)
})
test_that("genetic_cor mode = \"table\"", {
skip_on_cran()
trait <- "body mass index"
expect_error(
df <- genetic_cor(
trait = trait
),
NA
)
expect_is(df, "tbl_df")
})
test_that("genetic_cor mode = \"raw\"", {
skip_on_cran()
trait <- "body mass index"
expect_error(
response <- genetic_cor(
trait = trait,
mode = "raw"
),
NA
)
expect_equal(length(response), 2L)
})
test_that("genetic_cor cor_coef_threshold", {
skip_on_cran()
trait <- "Body mass index"
expect_error(
response <- genetic_cor(
trait = trait,
cor_coef_threshold = 0.8
),
NA
)
expect_error(
response <- genetic_cor(
trait = trait,
cor_coef_threshold = 0.6
),
NA
)
expect_error(
response <- genetic_cor(
trait = trait,
cor_coef_threshold = 0.4
),
NA
)
})
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